Scedosporium Network -> Clinical strains
 
  Deposit of data. Step 1.
To submit data to the curator of the database(s), please register first. Then, select the database and table where you wish to store your data. Enter all available data into the relevant fields (note: fields marked in red * are mandatory). Click on the 'Next step' button to go to the second step of the deposit procedure where additional data, files and remarks could be sent to the curator. You and the curator will receive an email confirming the deposit. It will be up to the curator to accept, modify and/or refuse the deposited data.


Select database:  
 
Select table:
 
 
Your unique identifier (strain/specimen numbers, ...) of the deposit*:
 
 
Remarks: fields in red followed by an asterisk * have to be filled
 
 
 


Main index (use it to navigate to the wanted set of fields):


      1. Strain's general data
      2. Patient's data
      3. Mycological data


1. Strain's general data


Depositor reference number of the isolate *:    


Other collections numbers:    


Date of isolation of the strain (dd/mm/yyyy):    


Strain cultured from/substrate*:    


Name of the depositor*:    


Depositor's centre name and address:    


Species name given by the depositor*:    


Species name given by the Scedosporium group:    


Fungal states:     

Graphium state present
both state present
cleistothecia present
?


ITS sequence (Paste sequence):    


Large subunit rDNA 26-28S (Paste sequence):    


General remarks:    


2. Patient's data


Patient's city, country and hospital/ward:    


Sex*:     

male
unsure
female
?


Race:     

Caucasian: ?Abs.Var.Pres.
African: ?Abs.Var.Pres.
European: ?Abs.Var.Pres.
Asian: ?Abs.Var.Pres.
Indian: ?Abs.Var.Pres.
Other: ?Abs.Var.Pres.


Age of patient:    


Associated Scedosporium pathology:     

Colonization: ?Abs.Var.Pres.
Allergic Bronchopulmonary (ABP) scedosporiosis: ?Abs.Var.Pres.
Sinusitis: ?Abs.Var.Pres.
Cutaneous infection: ?Abs.Var.Pres.
Mycetoma: ?Abs.Var.Pres.
Ocular infection: ?Abs.Var.Pres.
Bloodstream infection: ?Abs.Var.Pres.
Osteomyelitis: ?Abs.Var.Pres.
Arthritis: ?Abs.Var.Pres.
Endocarditis: ?Abs.Var.Pres.
Other: ?Abs.Var.Pres.


Associated Scedosporium pathology remarks:    


Date of Scedosporium diagnosis:    
 Select a date
Expected format is day/month/year, e.g. 06/01/2009

Predisposing disease(s), factors:     

Cystic fibrosis: ?Abs.Var.Pres.
Near drowning: ?Abs.Var.Pres.
Surgical operation: ?Abs.Var.Pres.
Trauma (accidental): ?Abs.Var.Pres.
Cancer Bone Marrow Transplantation (BMT): ?Abs.Var.Pres.
Cancer Hematopoeitic Stem Cell Transplantation (HSCT): ?Abs.Var.Pres.
Cancer, non-ablative allogeneic transplant: ?Abs.Var.Pres.
Cancer Graft Versus Host Disease (GVHD): ?Abs.Var.Pres.
Organ transplant: ?Abs.Var.Pres.
Tacrolimus: ?Abs.Var.Pres.
Diabetes: ?Abs.Var.Pres.
AIDS/HIV: ?Abs.Var.Pres.
Other: ?Abs.Var.Pres.


Predisposing disease(s) remarks:    


CD4 cells:    

Encode a positive numeric value, e.g. 50

Imaging data remarks:    


Corticosteroid, Immunosuppressive & Antimicrobial treatments 1 month prior to diagnosis: Drugs, Dosages, Starting and Stopping dates:    


Clinical data remarks (fever, neurological and pulmonary signs, ...):    


Surgery remarks:    


Date of surgery (dd/mm/yyyy):    
 Select a date
Expected format is day/month/year, e.g. 06/01/2009

Antifungal treatment of Scedosporium infection: Drugs, Dosages, Starting and Stopping dates:    


Outcome of patient after Scedosporium treatment :     

Death
Death due to other disease(s)
Cured
?


Outcome date (dd/mm/yyyy):    
 Select a date
Expected format is day/month/year, e.g. 06/01/2009

3. Mycological data


Hyphae in direct microscopy :     

Absent
Absent or present
Present
?


Histopathology: organ/biopsy/autopsy:    


Antibody detection:    


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